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CRG Viral Beacon - Motif Query

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0 2000 4000 6000 8000 10000 12000 14000 16000 18000 20000 22000 24000 26000 28000 gene: ORF1ab [266 - 21555] gene: ORF3a [25393 - 26220] gene: E [26245 - 26472] gene: M [26523 - 27191] gene: ORF6 [27202 - 27387] gene: ORF7a [27394 - 27759] gene: ORF7b [27756 - 27887] gene: ORF8 [27894 - 28259] gene: N [28274 - 29533] gene: ORF10 [29558 - 29674] gene: S [21563 - 25384] functional: leader protein [206 - 805] functional: nsp2 [806 - 2719] functional: nsp3 [2720 - 8554] functional: nsp4 [8555 - 10054] functional: 3C-like proteinase [10055 - 10972] functional: nsp6 [10973 - 11842] functional: nsp7 [11843 - 12091] functional: nsp8 [12092 - 12685] functional: nsp9 [12686 - 13024] functional: nsp10 [13025 - 13441] functional: nsp11 [13442 - 13480] functional: RNA-dependent RNA polymerase [13442 - 16236] functional: helicase [16237 - 18039] functional: 3'-to-5' exonuclease [18040 - 19620] functional: endoRNAse [19621 - 20658] functional: 2'-O-ribose methyltransferase [20659 - 21552] cds: surface glycoprotein [21563 - 25384] cds: envelop protein [26245 - 26472] cds: membrane glycoprotein [26523 - 27191] cds: nucleocapsid phosphoprotein [28274 - 29533] cds: ORF1ab polyprotein [266 - 21555] cds: ORF1a polyprotein [266 - 13483] functional: Coronavirus frameshifting stimulation element stem-loop 1 [13476 - 13503] functional: Coronavirus frameshifting stimulation element stem-loop 2 [13488 - 13542] functional: Coronavirus 3' UTR pseudoknot stem-loop 1 [29609 - 29644] functional: Coronavirus 3' UTR pseudoknot stem-loop 2 [29629 - 29657] functional: Coronavirus 3' stem-loop II-like motif (s2m) [29728 - 29768] cds: ORF3a protein [25393 - 26220] cds: ORF6 protein [27202 - 27387] cds: ORF7a protein [27394 - 27759] cds: ORF7b protein [27756 - 27887] cds: ORF8 protein [27894 - 28259] cds: ORF10 protein [29558 - 29674]
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